Completed projects and reports

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Sugar Research Australia, Sugar Research Development Corporation and BSES reports from completed research projects and papers.

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Assessing clonal and nitrogen interaction on ccs in sugarcane in the wet tropis ; SRDC project BSS180 final report
(2003) Hurney, AP; Berding, N; Grace, D
There has been a negative trend in CCS in the Tully-Mossman region since the mid-1960s that has been linked to increased extraneous matter and suckers in the cane supply. The situation had become particularly bad during 1990-1996, with most mill districts within the region experiencing problems with low CCS. An increase in the frequency of lodging and incidence of suckers was possibly contributing to this problem and there was a perception that this was related to inappropriate use of nitrogen fertiliser for the locally grown cultivars. There were also concerns that current cultivars were not suited to the local environmental conditions. Growers choosing to grow inappropriate cultivars for particular locations were thought to be exacerbating the problem.Decisions on what cultivar to grow and how much fertiliser to apply are management options that could be modified if they were contributing to the low CCS problem. These issues were addressed in this project by studying the effects of four rates of nitrogen (0, 70, 140, 210 kg N/ha) on lodging, suckering, CCS and cane yield of the three cultivars Q117, Q120 and Q138. These experiments were conducted on three different soil types at three locations within the Tully mill district. The objectives of this project were to provide a better understanding of the role of nitrogen and cultivars in the low CCS issue to facilitate the development of improved management options.In the plant crops, which were planted after a fallow, nitrogen had no influence on cane yield, CCS, lodging or suckering under the environmental conditions in which these crops were grown. However, it did increase both cane yield and lodging in first- and second-ratoon crops. Responses were limited by adverse interactions with the wet conditions and nitrogen losses due to leaching and/or volatilisation. Nitrogen had no direct influence on CCS in the ratoon crops, but it did have an indirect negative effect, because it increased the incidence of lodging. Rates of N application could be reduced in both plant and ratoon crops, which would reduce production costs. It would also be beneficial environmentally.There was no evidence of nitrogen accumulation in the soil from high nitrogen fertiliser application even following a low-yielding crop. This is of concern from an environmental viewpoint if inappropriate nitrogen rates are applied, as any excess nitrogen will be lost from the soil due to leaching or denitrification. The data suggested that the critical leaf nitrogen concentration might vary between cultivars. This provides an opportunity to reduce nitrogen rates for cultivars with lower nitrogen requirements.Current cultivars do have high potential CCS, but this cannot be realised, partially because of their susceptibility to lodging and suckering. All three cultivars tested, Q117, Q120 and Q138, are susceptible to lodging in well-grown crops. It appears that the susceptibility of Q120 and Q138 is high in crops yielding more than 70-80 t/ha under the wet conditions of the wet tropics.The potential reduction in CCS from total lodging was estimated at about 10% across all cultivars in these trials. The actual loss in CCS is governed by the actual proportion of lodging in the crop and was estimated at 0.4 units in crops that had 25% lodging. This is a hidden cost of which growers are generally not aware. There are no management options that can be implemented to minimise this loss. Severe and multiple lodging events had a negative impact on CCS and cane yield in Q120 and Q138, reducing profitability. In these circumstances, the negative effects of lodging can be reduced if the time between harvesting and occurrence of lodging is reduced. Increased returns to the grower of $200 $300/ha are possible using this strategy.Lodging was less extensive in Q117 and lower-vigour cultivars, such as Q117, may offer a more appropriate ideotype for the wet tropics, because of their lower susceptibility to lodging. Economic impact was estimated at a loss of $7.5 million to growers within the region from a moderate lodging event affecting 25% of the crop. Adoption of agronomic practices to improve physical support of the crop is only partially successful in reducing the intensity of lodging. This can only be achieved by the implementation of a research program to select cultivars with a low incidence of lodging, while maintaining or improving productivity.The cultivars Q117, Q120 and Q138 are representative of those being grown in the wet tropics and demonstrated a high propensity to sucker. Lodging is not a pre-requisite for sucker initiation, as the emergence of suckers was generally first noted under a closed canopy. Suckers have a negative effect on CCS, because they dilute the cane juice through their high moisture and low sucrose composition. In these experiments, 10% by weight of suckers in the cane supply reduced CCS by a little over 1 unit. The increased cane yield from suckers is inflating productivity estimates but not improving profitability; the level of suckering experienced in these experiments would reduce regional grower-income by approximately $6 million. It is possible to select against suckering propensity and this has already been introduced into the crop improvement program. However, research into the relationship between suckers and longevity of ratoons is required because of the potential impact on productivity.An appropriate extension program needs to be developed to disseminate the findings of this research to growers. The results from this project have been extended to the industry. There have also been extension programs for BMP of cultivars. However, there is still a large gap between extension and adoption, which is why additional extension programs are recommended. Adoption of findings on nitrogen will reduce production costs, as well as have a positive environmental impact. Management strategies are available to partially alleviate the negative impacts of lodging and suckering. However, further research is required to fully overcome the effects of these phenomena.
Environmental stimuli for sugarcane suckering in the wet tropics : SRDC final report BSS221
(2003) Berding, N; Hurney, AP; Bonnett, GD; Joseph, F
The northern section of the industry has been in crisis for most of the years in the decade up to 2002 because of declining CCS. This decline has been due to increased extraneous matter levels due largely to increased sucker culm content of the crop. These have developed because of marked wet episodes during the harvest period in the majority of years in this period. This resulted in open canopy situations, because of sprawling and lodging, increased light penetration, and initiation and development of sucker culm populations.A hypothesis was proposed that excessive mature-crop moisture, combined with continued excessive nitrogen use, particularly early in the decade were initiating variables for the problem. Observations suggested that light, via an open canopy situation, also was a driver.The project tackled the problem with a preliminary series of experiments that allowed optimisation of management and data collection techniques for use in a main experiment proposed. The main experiment sought to establish the importance of levels of three environmental variables, light, nitrogen and moisture, on sucker initiation, and their interaction with each other and with two cultivars of known suckering propensity under commercial conditions.The preliminary experiments allowed us to make the following recommendations for the design and methods for the main experiment:1. The late nitrogen application of 70 kg N will be in late April early May if the weather is suitable and as soon as possible thereafter if the weather is too wet to allow the application at the desired time.2. That spectroradiometry measurements will be made in the core plots at a height of 10 cm and 1 m to determine the effect of plant spacing on the spectral composition received. Photosynthetically active radiation measurements will also be made.3. A similar soil sampling and nitrate measurement regime will be made in the main experiment as that in the preliminary experiment with the exception that more frequent smaller diameter cores will be taken to speed up sampling.4. Sucker counting and other trial management will continue as originally proposed.5. Applications of late N will be made in separate experiments on different cultivars and if possible to soils with low basal nitrate levels.
Resistance mechanisms and selection for resistance in sugarcane to sugarcane weevil borer : SRDC final report BSS15
(BSES, 2005) Berding, N
This project primarily sought to determine resistance mechanisms and selection mechanisms for resistance in sugarcane to SWB (Sugarcane weevil borer). As such it addressed the SRDC strategies of developing more productive cultivars by increasing clonal resistance to insect pests, and of developing resource management practices that ensure sustainable productivity through the expanded use of GCTB. From prior assessment of SWB infestation in parental clones at BSES Meringa and clones in advanced selection trials in the crop-improvement program based on on BSES Meringa, as well as reference to existing literature, reaction to SWB infestation obviously is a multifaceted trait that may encompass many individual plant traits. This research was based on a hypothesis that attempted to cover as many of these traits and their possible interaction with the insect.
Understanding the reproductive biology and ecology of sugarcane to manage the safe release of genetically modified cultivars
(2010) Bonnett, G; Olivares-Villegas; Berding, N; Morgan, T; Collins, P
This project set out to obtain basic and previously unavailable information on the ecology and sexual reproduction of sugarcane primarily so advances in sugarcane biotechnology can be utilised to the benefit of the Australian sugarcane industry and the broader Australian economy. The production and commercialisation of genetically modified (GM) sugarcane has attracted increased international interest in recent years, and this has been exemplified by significant, sustained investment in sugarcane biotechnology by large national and international companies. To commercialise GM sugarcane, the proposed cane has to undergo rigorous regulatory assessment including safety to humans and the environment. A significant part of this assessment relates to how a given sugarcane clone functions in the environment (s) where it will be grown, and the likelihood and impact of transfer of the modified trait to other commercial sugarcane or other sympatric sexually compatible species. While such assessments are performed for each proposed GM sugarcane cultivar under consideration, general information about the sexual reproduction and ecology of sugarcane is also important to help understand potential hazards. For sugarcane, this basic information is scant, largely because the stalk not the seed is the harvested product (i.e. sugarcane is vegetatively propagated) and so the sexual reproduction process have not previously been studied in commercially grown sugarcane. This project undertook a series of studies to help fill the ‘information void’ on sugarcane. The project involved several surveys and experiments using cane in farmers’ fields to understand the level of flowering and viable seed production under commercial production. Species that could be sexually compatible with sugarcane were determined through analysis of the breeding literature to see what crosses had been achieved with human intervention. This was followed by comparison with botanical records to determine which of the potential species were present in sugar growing regions.
Introgression of new genes from Saccharum officinarum
(SRDC, 2004) Jackson, P; Piperidis, G; Aitken, K; Li, J; Morgan, T; Foreman, J; Hewitt, M; McIntyre, L; Berding, N
Modern sugarcane cultivars are derived from two main ancestral species: Saccharum officinarum, which is the main source of high sucrose levels, and S. spontaneum. Only a small number of clones of either species have ever been incorporated into commercial cane breeding programs around the world. While incremental gains in cane yield and ratooning have been made by sugarcane breeders over the last 40 years sugarcane, there is concern that improvement in CCS has been very limited. One hypothesis for this is that because of the limited genetic base of sugarcane favourable alleles for high CCS in the breeding parent pool have already been fixed in current cultivars. If this hypothesis is correct then new genetic diversity will need to be introgressed from germplasm outside current breeding programs. Clones of S. officinarum, available in germplasm collections may provide a source of valuable high sucrose genes. However, introgression breeding using traditional breeding technologies is long term and high risk. The development of new DNA marker techniques has provided new opportunities for improving introgression breeding. These techniques provide a means to (i) characterise diversity within germplasm collections, (ii) identify genes or chromosomal regions, termed quantitative trait loci (QTL), from wild parents which cause positive or negative effects on important traits, which may then be selected for or against during breeding cycles. With this background in mind, this project had two concurrent aims: (i) To characterise a collection of S. officinarum clones for important phenotypic traits and for genetic diversity using DNA markers and identify a set of these for future breeding efforts; (ii) Using case study populations, to assess the value of using DNA marker assisted selection in introgression breeding in sugarcane. A range of candidate S. officinarum x commercial parent crosses were made at the start of the project using a random sample of S. officinarum clones not previously used in our breeding breeding program. From these a “case study” population was chosen for detailed investigation using DNA markers. Two of the progeny were subsequently chosen for “backcrossing” again to proven commercial parents to produce two other “backcross” populations. Concurrently, the collection of 282 S. officinarum clones in the Australian collection was also characterised using DNA markers, along with 147 parent clones in the Australian core breeding program. A subset of 158 S. officinarum clones, recently imported from overseas, was also evaluated in a field trial for CCS and cane yield across a plant and two ratoon crops.
Effect of far-red radiation on flowering of Saccharum spp. hybrids : SRDC Final report BS1S
(1990) Berding, N; Moore, PH
Many tropical sugarcane clones (Saccharum spp. hybrids) are unavailable for hybridization because of poor flowering. Methods are required to improve the flowering of such clones. This study was conducted to determine whether far-red radiation (> 700 nm) at end-of day would improve flowering. Three treatments in a photoperiod facility (PPF) were compared to an external control (EC) under natural photoperiod. A basic treatment known as modified Florida (MF) was used in all PPF treatments and served as the internal control. This was altered to provide a far-red (FR) treatment, by addition of either 5 or 10 min of far-red radiation at end-of-day, and a day interrupt (Dr) treatment, by imposition of 2 hr of darkness in mid afternoon. Percent flowering as harvested panicles was 21.0, 24.2, 24.6, and 9.5 for FR, Dr, MF, and EC, respectively. Total flowering was 23.4, 28.9, 27.0, and 10.7, respectively. The PPF treatments did not differ significantly for either measure. All were highly significantly greater than EC. The far-red treatments did not differ for harvested panicles. Treatments differed significantly for time of flowering. The flowering sequence was EC, MF, FR, and then DI. There were significant differences among clones in all treatments for emergence day, initiation day, elapsed days, and pollen test. Correlations among these measures were varied, with some being significant. Far red at end-of-day neither stimulated nor inhibited flowering in the PPF treatments. The FR and Dr treatments delayed emergence of flowering.
Assessment of bulk segregant analysis and marker- assisted selection for economically important traits in sugarcane : SRDC final report BS138
(1998) Carroll, B; Berding, N; McIntyre, L
The main aim of this project was to assess the feasibility of bulk segregant analysis (BSA) and marker-assisted selection for important traits in sugarcane. The target trait for this feasibility study was rust resistance. Initially, crosses were successfully made between susceptible and resistant parents to produce two mapping populations. Unfortunately and surprisingly, we were not able to identify fully susceptible clones in four separate rust trials on the two populations. Poor rust development occurred in the first bench trial in 1996 at Meringa (including clones known to be susceptible), and the second trial in January 1997 was a total failure due to lack of rust development. The third rust resistance trial was conducted in Meringa in July 1997, but all of the clones in the mapping populations were resistant. The fourth rust trial on these two populations was completed at the start of 1998, and the results confirmed that all of the clones in these two initial mapping populations were resistant to common rust. Lack of segregation for rust resistance within progeny of sugarcane crosses had not been observed previously by sugarcane breeders in Meringa. This unexpected problem delayed the project as BSA could only proceed after a mapping population segregating for rust resistance had been identified.
Effect of far-red radiation on flowering of Saccharum spp. Hybrids : SRDC final report BS1S
(1990) Berding, N; Moore, PH
Many tropical sugarcane clones (Saccharum spp. hybr ids) are unavailable for hybridization because of poor flowering. Methods are required to improve the flowering of such clones. This study was conducted to determine whether far-red radiation (> 700 nm) at end-ofday would improve flowering. Three treatments in a photoperiod facility (PPF) were compared to an external control (EC) under natural photoperiod. A basic treatment known as modified Florida (MF) was used in all PPF treatments and served as the internal control. This was altered to provide a far-red (FR) treatment, by addition of either 5 or 10 min of far-red radiation at end-of-day, and a day interrupt (DI) treatment, by imposition of 2 hr of darkness in mid afternoon. Percent flowering as harvested panicles was 21.0, 24.2, 24.6, and 9.5 for FR, DI, MF, and EC, respectively. Total flowering was 23.4, 28.9, 27.0, and 10.7, respectively. The PPF treatments did not differ significantly for ei ther measure. All were highly significantly greater than EC. The far-red treatments did not differ for harvested panicles. Treatments differed significantly for time of flowering. The flowering sequence was EC, MF, FR, and then Dr. There were significant differences among clones in all treatments for emergence day, initiation day, elapsed days, and pollen test. Correlations among these measures were varied, with some being significant. Far red at end-of-day neither stimulated nor inhibited flowering in the PPF treatments. The FR and Dr treatments delayed emergence of flowering.
Optimum plot shape for variety trials - effect of competition between varieties : Final report 39905083
(1991) Berding, N; Skinner, JC
Four plot shapes were compared using four replications of 60 clones. The shapes were 4-row long (4L), 4-row short (4S), 2-row long (2L) and 1-row long (1L). The standard length of 9.2m was used for long plots, short plots being 4.6m. A special design was used to compare all plot shapes in sub-blocks of six clones, but it was analysed as randomised complete blocks. With guard rows and ends the trial occupied 3.7 ha. It was located on the farm of L Johnson in the Mulgrave mill area.
Effect of far-red radiation on flowering of saccharum spp. hybrids
(1990) Berding, N; Moore, PH
Many tropical sugarcane clones (Saccharum spp. hybrids) are unavailable for hybridization because of poor flowering. Methods are required to improve the flowering of such clones. This study was conducted to determine whether far-red radiation (> 700 nm) at end-of-day would improve flowering. Three treatments in a photoperiod facility (PPF) were compared to an external control (EC) under natural photoperiod. A basic treatment known as modified Florida (MF) was used in all PPF treatments and served as the internal control. This was altered to provide a far-red (FR) treatment, by addition of either 5 or 10 min of far-red radiation at end-of-day, and a day interrupt (DI) treatment, by imposition of 2 hr of darkness in mid afternoon. Percent flowering as harvested panicles was 21.0, 24.2, 24.6, and 9.5 for FR, DI, MF, and EC, respectively. Total flowering was 23.4, 28.9, 27.0, and 10.7, respectively. The PPF treatments did not differ significantly for either measure. All were highly significantly greater than EC. The far-red treatments did not differ for harvested panicles. Treatments differed significantly for time of flowering. The flowering sequence was EC, MF, FR, and then DI. There were significant differences among clones in all treatments for emergence day, initiation day, elapsed days, and pollen test. Correlations among these measures were varied, with some being significant. Far red at end-of-day neither stimulated nor inhibited flowering in the PPF treatments. The FR and DI treatments delayed emergence of flowering.

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